Resources Developed by SysMO-DB and Other Consortium Members

These resources have either been developed by the groups involved in SysMO-DB, or by people from the wider SysMO consortium. We plan to incorporate or link to many of these resources from SysMO-HUB

• JWS Online- a model repository and simulation tool developed by Jacky Snoep
• Copasi - a model simulation environment developed by the groups of Pedro Mendes at the University of Manchester and Ursula Kummer at EML Research, Heidelberg
• Semantic SBML - for the annotation and merging of models. It is developed by the semantic SBML team at Humboldt University Berlin

• SABIO-RK System for the Analysis of Biochemical Pathways - Reaction Kinetics. Developed by the Scientific Databases and Visualisation group at EML Research Heidelberg

• TavernaTaverna - a workflow design and execution environment developed by the myGrid project at the University of Manchester, led by Carole Goble
• myExperiment - a workflow Repository and workflow runing environment developed by the groups of David De Roure at the University of Southampton, and Carole Goble at the University of Manchester
• Workflow Pack for Systems Biology - a collection of workflows from myExperiment which may be useful in Systems Biology research, and therefore in SysMO projects