Ontologies and Controlled Vocabularies useful in SysMO
OBO ontologies available through the Ontology Lookup Service
BTO BRENDA tissue / enzyme source
CHEBI Chemical Entities of Biological Interest
CL Cell Type
ECO Evidence Codes
EFO ArrayExpress Experimental Factor Ontology
ENVO Environmental Ontology
FAO Fungal Gross Anatomy
FBbi Biological Imaging Methods
FIX Physico-Chemical Methods and Properties
GO Gene Ontology
IEV Event (INOH)
IMR Molecule Role (INOH)
MI Molecular Interaction (PSI MI 2.5)
MOD Protein Modifications (PSI-MOD)
NEWT NEWT UniProt Taxonomy Database
OBO_REL OBO Relationship Types
PAR Protein Affinity Reagents
PATO Phenotypic qualities (properties)
PRIDE Controlled Vocabulary
PSI Mass Spectroscopy CV (PSI-MS)
PW Pathway Ontology
REX Physico-Chemical Process
RO Multiple Alignment
SEP Separation Methods
SO Sequence Types and Features
UO Unit Ontology